Bigty....looks like you're looking for what I have in my motor.
I've been researching these engine for about 3 years now and finally pulled the trigger on one about a year and a half ago.
Here are my recommendations.
Camshaft - One of the most popular camshafts in LS1 history is the Thunder Racing 224/224. It is a .563 lift and you can get it in either 112 lsa for manuals or 114 lsa for automatics. This is the cam I went with.
Oiling System - The '98-2001 LS1's had subpar oil pumps on them. When modifying a '98, it is absolutely essential that you swap that pump off of there in favor of a ported LS6 unit. You can get these through Texas Speed. Another weak area was in the PVC system where a lot of oil was allowed to get into the induction area. The LS6 PVC system helps to solve this problem to a degree. I would recommend switching to that.
Bottom End - If you're going to go as far as to replace the oil pump then you might as well pull the pan and swap out the connecting rod bolts. Yeah you might not need them now but you never know in the future if you're going to go bigger with your camshaft or valvetrain. It's when that day comes that you'll be glad you went the extra 10 feet when you had the chance.
Valvetrain - Get rid of the stock timing chain and replace it with an LS2 chain. You can also get these through Texas Speed. The pushrods will also need to go, LS1's have weak pushrods. As far as cylinder heads....the best bang for the buck is Patriot Performance's Stage II LS6 heads. They are completely CNC ported with a competition valve job, brand new for $1095. You can't beat it. Although being since you had '98 cylinder heads, you will have to track down some center bolt valve covers over at LS1tech.com. Shouldn't be too hard to do. '98s had perimeter bolt valve covers and they will not work on 243 castings (LS6 heads).
Intake - If the budget doesn't allot for an LS6 intake then just stick with the LS1. Although I would junk the EGR and block the hole that is at the top.
A great resource for LS1 mods is
www.ls1howto.com
I also have a spreadsheet for my build which lists all the parts and prices. My LS1 cost me a grand total of $6004 to build (thats including the price of the engine itself that I bought from a salvage yard). Not bad for an all-aluminum small block with roller camshaft, fuel injection, alterator, starter, water pump, powersteering pump, and serpentine drive. I am told I should be good for around 470-480 flywheel horsepower. You can't beat the power and what you get for the price with these engines.
PM me if you have any further questions. There's a lot more I can share with you. Always happy to help out.